Population genetic structure of macrozoobenthic invertebrates: Its implications for coastal resource management

Authors

  • Yashier Upling Jumah Aquaculture Department, College of Fisheries, Mindanao State University - Tawi-Tawi College of Technology and Oceanography, Sanga-Sanga, Bongao 7500, Tawi-Tawi, Philippines.

DOI:

https://doi.org/10.30574/gscarr.2020.3.3.0040

Keywords:

Fishery management, Panmictic, Genetic diversity, Sedentary, Mesoscale

Abstract

Population genetics is not only a mere tool in determining the evolutionary aspect of an organism, nevertheless, also as a tool that implicates macrozoobenthic invertebrate population at the risk of over-exploitation, extinction, declining in number, and sustainable in status. These implications make the population genetically useful that unravel mysterious propound doubts beneath the vast seas and oceans. Macroozoobenthos species such as snails, clams, mussels, lobsters, crabs, shrimps, abalones, oysters, and corals are meroplankton that once in their life cycle they spent as plankton. They float in the water column and have transported hundreds to thousands of nautical miles depending on the water current before settling down and resume benthic mode of life. Their creeping and sedentary lifestyles are prone to easy collecting and gleaning, resulting in over-exploitation and over-harvesting in different regions. Thus, this review aims to consolidate several findings on the population genetic structure of macrozoobenthic species, which has implications for coastal resource management. Collectively, studies revealed that population genetic structures of macrozoobenthic invertebrates such as fine-scale, mesoscale and panmictic population that has genetic diversity, genetic differences, genetic homogeneity, and low genetic variability governed by the demographic barrier, salinity, water temperature, current, distance, and many others. Thus, population genetics is a vital tool in drafting, formulating, and conceptualizing conservation and protection measures of macrozoobenthic species with regards to coastal resource management.

Metrics

Metrics Loading ...

References

Romain M, Gregory C, Pierre B, Laurent C, Florian B, Oivind S and Jean L. (2016). Genetic structure of a commercially exploited bivalve, the great scallop (Pecten maximus) along the European coasts. Conservation Genetics, 17(1), 57-67.

Mundy C. (2013). Genetic population structure in greenlip abalone from SE Australia: implications for management of an important commercial fishery. Sardi Seminar Series.

Hui M, Kraemer WE, Seidel C, Nuryanto A, Joshi A and Kochzius M. (2016). Comparative genetic population structure of three endangered giant clams (Cardiidae: Tridacna species) throughout the Indo-West Pacific: Implications for divergence, connectivity and conservation. Journal of Molluscan Studies, 82, 403-414.

Banks MA, Minch JD and Stoner AW. (2014). Preliminary report on population genetic structuring among queen conch (Strombus gigas) from the Bahamas. Report to Community Conch.

Al-Saadi A. (2013). Population structure and patterns of genetic variation in a pear oyster (Pinctada radiata) native to the Arabian Gulf. Queensland University of Technology, Brisbane, Australia.

Kasinak JM, Bartholomew KA, Beekey M and Mattei J. (2010). Movement patterns and population genetic of the American horseshoe crab in relation to Long Island Sound conservation strategies. Biology Faculty Publication. Sacred Heart University, Fairfiled, USA.

Jeena NS, Gopalakrishnan A, Kizhakudan JK, Radhakrishnan EV, Kumar R and Asokan PK. (2015). Population genetic structure of the shovel-nosed lobster (Thenus unimaculatus; Decapoda, Scyllaridae) in Indian waters based on RAPD and mitochondrial gene sequences. Hydrobiologia.

Kennington WJ, Berry O, Groth DM, Johnson MS and Melville-Smith R. (2009). Evaluation of population structure in the western rock lobster. University of Western Australia.

Dao HT. (2016). Recruitment and genetic population genetics of spiny lobster (Panulirus ornatus and Panulirus homarus) in the south-east Asian archipelago. Ph.D. Dissertation, James Cook University, Australia.

Donrung P, Tunkijjanukij S, Jarayabhand P and Poompuang S. (2011). Spatial genetic structure of the surf clam (Paphia undulata) in Thailand waters. Zoological Studies, 50(2), 211-219.

Stoutamore JL. (2014). Population genetics and mating structure of blue king crab (Paralithodes platypus). A Master of Science Thesis, University of Alaska, Fairbank.

Lopez EH, Eastwood E and Drew J. (2017). Genetic connectivity among populations of lollyfish (Holothuria atra). In Mangubhai, S., Lalavanua, W., Purcell, S.W. (eds). Fiji’s sea cucumber fishery: Advances in science for improved management. Wildlife Conservation Society. Report No. 01/17, Suva, Fiji, 62-70.

Miller KJ, Maynard BT and Mundy CN. (2008). Genetic diversity and gene flow in collapsed and healthy abalone fisheries. Molecular Ecology.

Otwoma LM and Kochzius M. (2016). Genetic population structure of the coral reef sea star (Linckia laevigata) in the Western Indian Ocean and Indo-West Pacific. PLoS ONE, 11(10).

Miller KJ. (1997). Genetic structure of black coral population in New Zealand’s fjords. Marine Ecology Progress Series, 161, 123-132.

Arndt AD. (1996). Population diversity and molecular evolution of selected Eastern Pacific sea cucumber (Class: Holothuroidea) based on mitochondrial DNA. Simon Fraser University.

Goodbody-Gringley G, Woollacott RM and Giribet G. (2011). Population structure and connectivity in the Atlantic scleractinian coral (Montastraea cavernosa Linnaeus, 1767). Marine Ecology, 1-17.

Diniz FM, Maclean N, Ogawa M, Cintra IH and Bentzen P. (2005). The hypervariable domain of the mitochondrial control region in Atlantic spiny lobster and its potential as a marker for investigating phylogeographic structuring. Marine Biotechnology, 462-473.

Tang S, Tassanakajon A, Klinbunga S, Jarayabhand P and Menesveta P. (2004). Population structure of tropical abalone (Haliotis asinina) in coastal waters of Thailand determined using microsatellite markers. Marine Biotechnology, 6, 604-611.

Gutierrez-Gonzalez JL, Cruz P, Rio-Portilla MA and Perez-Enriquez R. (2007). Genetic structure of green abalone (Haliotis fulgens) population Off Baja California, Mexico. Journal of Shellfish Research, 26(3), 839-846.

Kawane M and Wada K. (2015). Genetic population of the rare brackish-water crab (Ptychognathus ishii; Sakai, 1939) (Varunidae) on the Japanese coast. Japanese Journal of Benthology, 70, 13-20.

Withler RE, Campbell A, Li S, Miller KM, Brouwer D and Lucas BG. (2001). High levels of genetic variation in Northern abalone (Haliotis kamtschatkana) of British Columbia. Canadian Science Advisory Secretariat.

Skillings DJ, Bird CE and Toonon RJ. (2011). Gateways to Hawai’i: Genetic population structure of the tropical seacucumber (Holothuria atra). Journal of Marine Biology, 1-16.

Coates JH, Hovel KA, Butler JL and Bohonak AJ. (2014). Recruitment and recovery of pink abalone (Haliotis corrugata) in a historically over-exploited kelp forest: Are local population self-sustaining? Journal of Experimental Marine Biology and Ecology, 400, 184-192.

Maggi C and Gonzalez-Wanguemert M. (2015). Genetic differentiation among Parastichopus regalis population in the Western Mediterranean Sea: Potential effects from its fishery and current connectivity. Mediterranean Marine Science, 16(3), 489-501.

Chiesa S, Lucentini L, Freitas R, Marzano FN, Breda S, Figuera E, Caill-Milly N, Herbert RJ, Soares AM and Argese E. (2016). Mapping the stranger: Genetic diversity of Manila clam in European coastal lagoons. Bulletin Japanese Fisheries Research Education, 42, 55-65.

Ali-Abadi MA, Naysi LA, Zolgharnean H and Zanoosi HP. (2016). The study of population genetics structure of Holothuria parva in the Persian Gulf using mtDNA sequences. International Journal of Life Sciences Biotechnology and Pharma Research, 5(1), 14-17.

De Noia M, Telesca L, Vendrami DLJ, Gokalp HK, Charrier G, Harper EM and Hoffman JI. (2020). Population genetic structure is unrelated to shell shape, thickness and organic content in European population of the soft-shell clam (Mya arenaria). Genes, 11, 298.

Gallagher J, Finarelli JA, Jonasson JP and Carlsson J. (2018). Mitochondrial d-loop DNA analyses of Norway lobster (Nephrops norvegicus) reveals genetic isolation between Atlantic and Mediterranean population.

Jenkins TL, Ellis CD, Triantafyllidis A and Stevens JR. (2019). Single nucleotide polymorphisms reveal a genetic cline across the north-east Atlantic and enable powerful population assignment in the European lobster. Evolutionary Applications, 12, 1881-1899.

Xuereb A, Benestan L, Normandeau E, Daigle RM, Curtis JMR, Bernatchez L and Fortin MJ. (2018). Asymmetric oceanographic processes mediate connectivity and population genetic structure, as revealed by RADseq, in a highly dispersive marine invertebrate (Parastichopus californicus). Molecular Ecology, 27, 2347-2364.

Nowland SJ, Silva CNS, Southgate PC and Strugnell JM. (2019). Mitochondrial and nuclear genetic analyses of the tropical black-lip rock oyster (Saccostrea echinata) reveals population subdivision and informs sustainable aquaculture development. BMC Genomics, 20, 711.

Singh SP, Groeneveld JC, Hart-Davis MG, Backeberg BC and Willows-Munro S. (2018). Seascape genetics of the spiny lobster (Panulirus homarus) in the Western Indian Ocean: Understanding how oceanographic features shape the genetic structure of species with high larval dispersal potential. Ecology and Evolution, 8, 12221-12237.

Wang YJ, Zeng QG and Xu LN. (2013). Population structure of the blood clam (Tegillarca granosa) in China based on microsatellite markers. Genetics and Molecular Research, 12(2), 892-900.

Lau JS, Ransangan J and Rodrigues KF. (2018). Genetic diversity and population structure of the Asian green mussel (Perna viridis) in the water of Sabah, Malaysis based on mitochondrial DNA d-loop sequence. Turkish Journal of Fisheries and Aquatic Sciences, 18, 109-117.

Zheng JH, Nie HT, Yang F and Yan XW. (2019). Genetic variation and population structure of different geographical populations of Meretrix petechialis based on mitochondrial gene COI. Journal of Genetics, 98, 68.

Yan RJ, Schnabel KE, Rowden AA, Guo XZ and Gardner JPA. (2020). Population structure and genetic connectivity of squat lobster (Munida Leach, 1820) associated with vulnerable marine ecosystems in the Southwest Pacific Ocean. Frontiers in Marine Science, 6, 791.

Hui M, Shi G, Sha Z, Liu Y and Cui Z. (2019). Genetic population structure in the swimming crab (Portunus trituberculatus) and its implications for fishery management. Journal of the Marine Biological Association of the United Kingdom, 99, 891-899.

Senevirathna J and Munasinghe D. (2014). Genetic diversity and population structure of Panulirus homarus populations of Southern Sri Lanka and South India revealed by the mitochondrial COI gene region. International Conference on Food, Biological and Medical Sciences. Bangkok, Thailand.

Morales F. (2004). Genetic signals of metapopulation structure of the queen conch (Strombus gigas) throughout Northern Intra-American Sea. 60thGulf and Caribbean Fisheries Institute.

Lapégue S, Heurtebise S, Cornette F, Guichoux E and Gagnaire PA. (2020). Genetic characterization of cupped oyster resources in Europe using informative single nucleotide polymorphism (SNP) panels. Genes, 11, 451.

Han ZQ, Li YZ, Chen GB and Gao TX. (2008). Population genetic structure of coral reef species Plectorhinchus flavomaculatus in South China Sea. African Journal of Biotechnology, 7(11), 1774-1781.

Silliman K. (2019). Population structure, genetic connectivity, and adaptation in the Olympia oyster (Ostrea lurida) along the west coast of North America. Evolutionary Applications, 12, 923-939.

Downloads

Published

2020-06-30

How to Cite

Jumah, Y. U. (2020). Population genetic structure of macrozoobenthic invertebrates: Its implications for coastal resource management. GSC Advanced Research and Reviews, 3(3), 001–010. https://doi.org/10.30574/gscarr.2020.3.3.0040

Issue

Section

Review Article